diff --git a/scripts/run.ps1 b/scripts/run.ps1
index 18593ae7fe..fe6a7b0ca4 100644
--- a/scripts/run.ps1
+++ b/scripts/run.ps1
@@ -142,7 +142,6 @@ function Restart {
     Docker-Compose-Pull
     Update-Lets-Encrypt
     Docker-Compose-Up
-    Docker-Prune
     Print-Environment
 }
 
@@ -177,6 +176,7 @@ elseif ($update) {
     Docker-Compose-Down
     Update -withpull
     Restart
+    Docker-Prune
     Write-Line "Pausing 60 seconds for database to come online. Please wait..."
     Start-Sleep -s 60
     Update-Database
diff --git a/scripts/run.sh b/scripts/run.sh
index 87d84f768f..e092c6f56c 100644
--- a/scripts/run.sh
+++ b/scripts/run.sh
@@ -170,7 +170,6 @@ function restart() {
     dockerComposePull
     updateLetsEncrypt
     dockerComposeUp
-    dockerPrune
     printEnvironment
 }
 
@@ -200,6 +199,7 @@ then
     dockerComposeDown
     update withpull
     restart
+    dockerPrune
     echo "Pausing 60 seconds for database to come online. Please wait..."
     sleep 60
     updateDatabase