diff --git a/scripts/run.ps1 b/scripts/run.ps1
index 3b67ebaba4..01bfe98bba 100644
--- a/scripts/run.ps1
+++ b/scripts/run.ps1
@@ -80,7 +80,8 @@ function Docker-Compose-Files {
 }
 
 function Docker-Prune {
-    docker image prune --force --filter="label=com.bitwarden.product=bitwarden"
+    docker image prune --all --force --filter="label=com.bitwarden.product=bitwarden" `
+        --filter="label!=com.bitwarden.project=setup"
 }
 
 function Update-Lets-Encrypt {
diff --git a/scripts/run.sh b/scripts/run.sh
index 9862b49ccc..416630fc8d 100644
--- a/scripts/run.sh
+++ b/scripts/run.sh
@@ -123,7 +123,8 @@ function dockerComposeFiles() {
 }
 
 function dockerPrune() {
-    docker image prune --force --filter="label=com.bitwarden.product=bitwarden"
+    docker image prune --all --force --filter="label=com.bitwarden.product=bitwarden" \
+        --filter="label!=com.bitwarden.project=setup"
 }
 
 function updateLetsEncrypt() {